This is the Kratos Nightly report for GCC ========================================= Failed Applications : 0 Compiling Errors : 0 Compiling Warnings : 2 /home/ubuntu/Kratos/kratos/processes/structured_mesh_generator_process.cpp:60:18: warning: unused variable ‘r_element’ [-Wunused-variable] /home/ubuntu/Kratos/applications/ShapeOptimizationApplication/custom_utilities/geometry_utilities.h:245:104: warning: typedef ‘hashmap_vec’ locally defined but not used [-Wunused-local-typedefs] Linking Error : 0 -- The C compiler identification is GNU 5.3.1 -- The CXX compiler identification is GNU 5.3.1 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Subversion: /usr/bin/svn (found version "1.9.3") additional default options were set for gcc CMAKE_CXX_FLAGS = -msse3 -std=c++11 -fopenmp -funroll-loops -ffast-math -Wall -std=c++11 CMAKE_C_FLAGS = -msse3 -fopenmp -funroll-loops -ffast-math -Wall KRATOS_EXCLUDE_OPENMP OpenMP included -- Try OpenMP C flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Try OpenMP CXX flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp -- Boost version: 1.59.0 -- Found the following Boost libraries: -- python -- Found PythonLibs: /usr/lib/python3.5/config-3.5m-x86_64-linux-gnu/libpython3.5m.so (found version "3.5.1+") -- The Fortran compiler identification is GNU 5.3.1 -- Check for working Fortran compiler: /usr/bin/gfortran -- Check for working Fortran compiler: /usr/bin/gfortran -- works -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Checking whether /usr/bin/gfortran supports Fortran 90 -- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes -- Detecting Fortran/C Interface -- Detecting Fortran/C Interface - Found GLOBAL and MODULE mangling -- Looking for Fortran sgemm -- Looking for Fortran sgemm - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- A library with BLAS API found. linker flags with blas = BLA_VENDOR = All -- A library with BLAS API found. -- Looking for Fortran cheev -- Looking for Fortran cheev - found -- A library with LAPACK API found. LAPACK = /usr/lib/liblapack.so/usr/lib/libblas/libblas.so.3.6.0 LAPACK modified = /usr/lib/lapack/liblapack.so.3.6.0/usr/lib/libblas/libblas.so.3.6.0 CMAKE_BUILD_TYPE ........ -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of off64_t -- Check size of off64_t - done -- Looking for fseeko -- Looking for fseeko - found -- Looking for unistd.h -- Looking for unistd.h - found INCOMPRESSIBLE_FLUID_APPLICATION ... MESHING_APPLICATION ................ ON EXTERNAL_SOLVERS_APPLICATION........ ON PFEM_APPLICATION.................... STRUCTURAL_APPLICATION.............. STRUCTURAL_MECHANICS_APPLICATION.... ON CONVECTION_DIFFUSION_APPLICATION.... ON SOLID_MECHANICS_APPLICATION......... ON PFEM_BASE_APPLICATION............... ON PFEM_SOLID_MECHANICS_APPLICATION.... ON MACHINING_APPLICATION............... FLUID_DYNAMICS_APPLICATION.......... ON PFEM_FLUID_DYNAMICS_APPLICATION..... ON STRING_DYNAMICS_APPLICATION......... ALE_APPLICATION..................... ON FSI_APPLICATION..................... ON EMPIRE_APPLICATION.................. ON MIXED_ELEMENT_APPLICATION........... DEM_APPLICATION..................... ON SWIMMING_DEM_APPLICATION............ ON CONSTITUTIVE_LAWS_APPLICATION....... THERMO_MECHANICAL_APPLICATION....... ON OPENCL_APPLICATION.................. MKL_SOLVERS_APPLICATION............. OFF MPI_SEARCH_APPLICATION.............. METIS_APPLICATION................... OFF TRILINOS_APPLICATION................ OFF TURBULENT_FLOW_APPLICATION.......... BLOOD_FLOW_APPLICATION.............. PURE_DIFFUSION_APPLICATION.......... MESHLESS_APPLICATION................ WIND_TURBINE_APPLICATION ........... CLICK2CAST_APPLICATION ............. MULTISCALE_APPLICATION ............. OFF PFEM2_APPLICATION................... FREEZING_SOIL_APPLICATION........... ADJOINT_FLUID_APPLICATION........... OFF POROMECHANICS_APPLICATION........... ON PARTICLE_MECHANICS_APPLICATION...... ON FORMING_APPLICATION................. DAM_APPLICATION..................... ON SHAPE_OPTIMIZATION_APPLICATION...... ON TOPOLOGY_OPTIMIZATION_APPLICATION... MY_LAPLACIAN_APPLICATION............ LAGRANGIAN_MPM_APPLICATION.......... CONTACT_MECHANICS_APPLICATION....... ON CONTACT_STRUCTURAL_MECHANICS_APPLICATION....... ON MAPPING_APPLICATION................. CONSTITUTIVE_MODELS_APPLICATION..... **** configuring KratosMeshingApplication **** **** configuring KratosExternalSolversApplication **** -- Try OpenMP Fortran flag = [-fopenmp] -- Performing Test OpenMP_FLAG_DETECTED -- Performing Test OpenMP_FLAG_DETECTED - Success -- Found OpenMP: -fopenmp additional default options were set for gfortran ----------------------****************---------------------- CMAKE_Fortran_FLAGS = -fopenmp -O3 -ffree-line-length-none -ffixed-line-length-none -cpp -fPIC **** configuring KratosStructuralMechanicsApplication **** **** configuring KratosConvectionDiffusionApplication **** **** configuring KratosFluidDynamicsApplication **** **** configuring KratosALEApplication **** **** configuring KratosFSIApplication **** **** configuring KratosEmpireApplication **** **** configuring KratosDEMApplication **** -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success **** configuring KratosSwimmingDEMApplication **** **** configuring KratosThermoMechanicalApplication **** **** configuring KratosSolidMechanicsApplication **** **** configuring KratosPfemBaseApplication **** **** configuring KratosPfemSolidMechanicsApplication **** **** configuring KratosPfemFluidDynamicsApplication **** **** configuring KratosPoromechanicsApplication **** **** configuring KratosParticleMechanicsApplication **** **** configuring KratosDamApplication **** **** configuring KratosShapeOptimizationApplication **** **** configuring KratosContactMechanicsApplication **** **** configuring KratosContactStructuralMechanicsApplication **** python libraries to be installed are: /usr/lib/x86_64-linux-gnu/libpython3.5m.so.1.0 -------------------------------- standard install dir /home/ubuntu/Kratos boost python lib used = /home/ubuntu/CompiledLibs/boost_1_59_0/stage/lib/libboost_python.so.1.59.0 installed blas = /usr/lib/libblas/libblas.so.3.6.0 installed lapack = /usr/lib/lapack/liblapack.so.3.6.0/usr/lib/libblas/libblas.so.3.6.0 -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: MKLSOLVER_INCLUDE_DIR MKLSOLVER_LIB_DIR PARMETIS_ROOT_DIR TRILINOS_ROOT -- Build files have been written to: /home/ubuntu/Kratos/cmake_gcc UnitTests: ============= | / | ' / __| _` | __| _ \ __| . \ | ( | | ( |\__ \ _|\_\_| \__,_|\__|\___/ ____/ Multi-Physics 5.0.18623 Running tests for KratosCore ...x....F...................s.....x.F. ====================================================================== FAIL: test_kratos_wrong_parameters (test_kratos_parameters.TestParameters) ---------------------------------------------------------------------- RuntimeError During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/ubuntu/Kratos/kratos/tests/test_kratos_parameters.py", line 188, in test_kratos_wrong_parameters self.kp["no_value"].GetInt() AssertionError: "no_value" does not match "" ====================================================================== FAIL: test_model (test_model.TestModel) ---------------------------------------------------------------------- RuntimeError During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/home/ubuntu/Kratos/kratos/tests/test_model.py", line 23, in test_model model["aaa"] AssertionError: "Error: The model part named : "aaa" was not found as root model part. total input string was "aaa"" does not match "" ---------------------------------------------------------------------- Ran 38 tests in 0.674s FAILED (failures=2, skipped=1, expected failures=2) Running tests for MeshingApplication [Warning]: No test script found for MeshingApplication Running tests for EmpireApplication [Warning]: Application has been found in "empire_application" directory but it was expected in "EmpireApplication". Please check the naming convetion. [Warning]: No test script found for EmpireApplication Running tests for ThermoMechanicalApplication [Warning]: No test script found for ThermoMechanicalApplication Running tests for StructuralMechanicsApplication ............ ---------------------------------------------------------------------- Ran 12 tests in 400.895s OK Running tests for DamApplication [Warning]: No test script found for DamApplication Running tests for PfemBaseApplication [Warning]: No test script found for PfemBaseApplication Running tests for SolidMechanicsApplication [Warning]: No test script found for SolidMechanicsApplication Running tests for ContactMechanicsApplication Traceback (most recent call last): File "/home/ubuntu/Kratos/applications//ContactMechanicsApplication/tests/test_ContactMechanicsApplication.py", line 54, in KratosUnittest.runTests(AssambleTestSuites()) File "/home/ubuntu/Kratos/applications//ContactMechanicsApplication/tests/test_ContactMechanicsApplication.py", line 40, in AssambleTestSuites nightSuite.addTests(KratosContactMechanicsGeneralTests) File "/usr/lib/python3.5/unittest/suite.py", line 57, in addTests for test in tests: TypeError: 'type' object is not iterable Running tests for PfemFluidDynamicsApplication [Warning]: No test script found for PfemFluidDynamicsApplication Running tests for ShapeOptimizationApplication [Warning]: No test script found for ShapeOptimizationApplication Running tests for SwimmingDEMApplication [Warning]: Application has been found in "swimming_DEM_application" directory but it was expected in "SwimmingDEMApplication". Please check the naming convetion. [Warning]: No test script found for SwimmingDEMApplication Running tests for PoromechanicsApplication [Warning]: No test script found for PoromechanicsApplication Running tests for ALEApplication [Warning]: Application has been found in "ALEapplication" directory but it was expected in "ALEApplication". Please check the naming convetion. [Warning]: No test script found for ALEApplication Running tests for FluidDynamicsApplication .... ---------------------------------------------------------------------- Ran 4 tests in 78.412s OK Running tests for ExternalSolversApplication [Warning]: No test script found for ExternalSolversApplication Running tests for ParticleMechanicsApplication [Warning]: No test script found for ParticleMechanicsApplication Running tests for PfemSolidMechanicsApplication [Warning]: No test script found for PfemSolidMechanicsApplication Running tests for DEMApplication [Warning]: Application has been found in "DEM_application" directory but it was expected in "DEMApplication". Please check the naming convetion. [Warning]: No test script found for DEMApplication Running tests for ContactStructuralMechanicsApplication ...............F ====================================================================== FAIL: test_execution (SmallTests.ThreeDPatchNotMatchingTestContact) ---------------------------------------------------------------------- Traceback (most recent call last): File "/home/ubuntu/Kratos/applications/ContactStructuralMechanicsApplication/tests/SmallTests.py", line 40, in test_execution self.test.Solve() File "/home/ubuntu/Kratos/applications/ContactStructuralMechanicsApplication/tests/Kratos_Execute_Solid_Test.py", line 113, in Solve process.ExecuteFinalizeSolutionStep() File "/home/ubuntu/Kratos/kratos/python_scripts/from_json_check_result_process.py", line 105, in ExecuteFinalizeSolutionStep self.assertAlmostEqual(value, value_json, 4) AssertionError: 0.6261879205498049 != 0.6261354424718251 within 4 places Stdout: 0 Construction of MechanicalSolver finished ::[Mechanical Solver]:: Variables ADDED ::[Mechanical Solver]:: Variables ADDED ::[Mechanical Solver]:: Variables ADDED ::[Mechanical Solver]:: Model reading starts. Import input model part. ::[Model_Prepare]:: -computing_domain- model part Number of tables : 0 Number of sub model parts : 0 Mesh 0 : Number of Nodes : 432 Number of Properties : 5 Number of Elements : 264 Number of Conditions : 64 Properties CONSTITUTIVE_LAW : 0x3d38860 This properties contains 0 tables Constitutive law initialized. ::[Mechanical Solver]:: Model reading finished. ::[Mechanical Solver]:: DOF's ADDED ::[Mechanical Solver]:: DOF's ADDED ::[Mechanical Solver]:: -START- ::[Mechanical Solver]:: -END- ---------------------------------------------------------------------- Ran 16 tests in 67.213s FAILED (failures=1) Running tests for FSIApplication ....... ---------------------------------------------------------------------- Ran 7 tests in 0.922s OK [Warning]: Application has been found in "FSIapplication" directory but it was expected in "FSIApplication". Please check the naming convetion. Running tests for ConvectionDiffusionApplication [Warning]: Application has been found in "convection_diffusion_application" directory but it was expected in "ConvectionDiffusionApplication". Please check the naming convetion. [Warning]: No test script found for ConvectionDiffusionApplication /home/ubuntu/Kratos/kratos/tests/test_KratosCore.py /home/ubuntu/Kratos/applications//MeshingApplication/tests/test_MeshingApplication.py /home/ubuntu/Kratos/applications//empire_application/tests/test_EmpireApplication.py /home/ubuntu/Kratos/applications//ThermoMechanicalApplication/tests/test_ThermoMechanicalApplication.py /home/ubuntu/Kratos/applications//StructuralMechanicsApplication/tests/test_StructuralMechanicsApplication.py /home/ubuntu/Kratos/applications//DamApplication/tests/test_DamApplication.py /home/ubuntu/Kratos/applications//PfemBaseApplication/tests/test_PfemBaseApplication.py /home/ubuntu/Kratos/applications//SolidMechanicsApplication/tests/test_SolidMechanicsApplication.py /home/ubuntu/Kratos/applications//ContactMechanicsApplication/tests/test_ContactMechanicsApplication.py /home/ubuntu/Kratos/applications//PfemFluidDynamicsApplication/tests/test_PfemFluidDynamicsApplication.py /home/ubuntu/Kratos/applications//ShapeOptimizationApplication/tests/test_ShapeOptimizationApplication.py /home/ubuntu/Kratos/applications//swimming_DEM_application/tests/test_SwimmingDEMApplication.py /home/ubuntu/Kratos/applications//PoromechanicsApplication/tests/test_PoromechanicsApplication.py /home/ubuntu/Kratos/applications//ALEapplication/tests/test_ALEApplication.py /home/ubuntu/Kratos/applications//FluidDynamicsApplication/tests/test_FluidDynamicsApplication.py /home/ubuntu/Kratos/applications//ExternalSolversApplication/tests/test_ExternalSolversApplication.py /home/ubuntu/Kratos/applications//ParticleMechanicsApplication/tests/test_ParticleMechanicsApplication.py /home/ubuntu/Kratos/applications//PfemSolidMechanicsApplication/tests/test_PfemSolidMechanicsApplication.py /home/ubuntu/Kratos/applications//DEM_application/tests/test_DEMApplication.py /home/ubuntu/Kratos/applications//ContactStructuralMechanicsApplication/tests/test_ContactStructuralMechanicsApplication.py /home/ubuntu/Kratos/applications//FSIapplication/tests/test_FSIApplication.py /home/ubuntu/Kratos/applications//convection_diffusion_application/tests/test_ConvectionDiffusionApplication.py